Getting transcriptomic coordinates for CDS exons from a GTF
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6.6 years ago
rubic ▴ 270

Hi,

Is there an R package/function that given a GTF file (or in a data.frame) can return a data.frame where each row is a CDS exon and its start and end coordinates relative to the spliced transcript?

GTF BED • 1.4k views
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