Sources for DNA accessibility data for certain Orgnisms
0
0
Entering edit mode
4.4 years ago
kimkes25 ▴ 50

Hello. I am looking for dna accessbility data (dnase-seq,atac-seq) for these Orgnisms and cells:

Orgnism   Cell

Hamster CHO K1
Tomato  tomato protoplasts
Tomato  tomato hairy roots
Soybean soybean protoplasts
Soybean soybean hairy roots
Banana  Banana protoplasts
Prawn   M. rosenbergii ES/HPT
Prawn   M. rosenbergii embryos

I tried these sources but most of then have only human data :

Plant data but not the organisms I need :

Do you know any other sources I can use to look for the data I need?

dnase-seq atac-seq encode • 920 views
ADD COMMENT
1
Entering edit mode

have you looked at the species specific resources? I'm not saying they will have the data you are looking for, but it might be. Eg.:

https://www.promusa.org/Global+Musa+Genomics+Consortium

https://banana-genome-hub.southgreen.fr/

(or the southgreen DBs in general?: https://www.southgreen.fr/ )

ADD REPLY

Login before adding your answer.

Traffic: 2723 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6