Entering edit mode
3.9 years ago
Sbrillo
▴
10
Hi!
I want to download all the PacBio reads from this experiment: SRS667972 ( SRX668744 - SRX668812) using the SRA-toolkit
I know from a previous post that something like that should work:
for (( i = 744; i <= 812; i++ ))
do
fastq-dump --accession SRX668$1
done
How can I change the loop to merge all the reads together while downloading them?