Information About The Caltech Rna-Seq Data On Encode And Its Corresponding Microarray Data?

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12.4 years ago

Tianyang Li ▴ 500

Hi,

I'm wondering if there's more information about the Caltech RNA-Seq data on ENCODE and the corresponding microarray data (GSE19090).

I'm trying to use the data to validate an RNA-Seq analysis method, and because there's not a lot of paired-end data for the MAQC samples, I'm interested in using this data.

Thanks!

encode rna-seq microarray • 2.8k views

ADD COMMENT • link 12.4 years ago by Tianyang Li ▴ 500

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There is a publication referenced at the GEO website. What other information do you need?

ADD REPLY • link 12.4 years ago by Sean Davis 27k

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I'm not sure about what the letter and numbers mean after each cell name for each GSE.

For example, I don't know what "DS8623" mean for "GM12878-DS8623".

I just emailed the authors.

ADD REPLY • link 12.4 years ago by Tianyang Li ▴ 500

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