Regarding Liftover and results

Question

[parveenkayenat]

Hi,

I perform the liftover and get the results of changed coordinate but i am not sure whether i got the correct results. Below is the glimpse of submited file and the result file. I put the parameters, Source assembly = GRCh37.p13 :: Primary Assembly and Target assembly = GRCh38.p11 :: Primary AssemblyAdditionally, does the allele information are same in build37 and build38?

Input File :

1:752566
1:752721
1:752894
1:753474
1:754503
1:754964
1:758144
1:759700

Feature SRC intervals Remap intervals Src location Src length Map location Map length Covering
Line:1  1   1   1:752566    1   1:817186    1   1.00000
Line:2  1   1   1:752721    1   1:817341    1   1.00000
Line:3  1   1   1:752894    1   1:817514    1   1.00000
Line:4  1   1   1:753474    1   1:818094    1   1.00000
Line:5  1   1   1:754503    1   1:819123    1   1.00000
Line:6  1   1   1:754964    1   1:819584    1   1.00000
Line:7  1   1   1:758144    1   1:822764    1   1.00000
Line:8  1   1   1:759700    1   1:824320    1   1.00000

Please help me in this regard, whether i got the correct results or not?

Thanks in advance

[DareDevil]

Can you tell us about the tool that you used to perform liftover?. Is it CrossMap ?

[parveenkayenat]

No, I use NCBI remapping.