chip-seq density statistical test
0
1
Entering edit mode
3.8 years ago
smurph50 ▴ 50

I have a ChIP-seq dataset of transcription factor A. There are genomic regions that we are interested in. Region 1 is 6 million base pairs and region 2 is 14 million bases. We found that there are 1500 ChIP-seq peaks per megabase in region 2 and 200 ChIP-seq peaks per megabase in region 1.

How would I test whether this difference in enrichment is significant? Any help is greatly appreciated.

ChIP-Seq • 559 views
ADD COMMENT

Login before adding your answer.

Traffic: 1544 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6