Hi I'm trying to download monocle3 according to the instructions on the website but its not working and I do not understand why. I was at this step:
devtools::install_github('cole-trapnell-lab/leidenbase') when the error showed as follows:
Downloading GitHub repo cole-trapnell-lab/leidenbase@HEAD
√ checking for file 'C:\Users\Jeffrey\AppData\Local\Temp\RtmpkjXLwG\remotes4a7479b34c59\cole-trapnell-lab-leidenbase-8c52ebc/DESCRIPTION' (385ms)
- preparing 'leidenbase': (1.1s)
√ checking DESCRIPTION meta-information ...
- cleaning src
- checking for LF line-endings in source and make files and shell scripts
- checking for empty or unneeded directories (2.5s)
- building 'leidenbase_0.1.2.tar.gz'
Warning: file 'leidenbase/configure' did not have execute permissions: corrected
Warning: file 'leidenbase/src/cigraph/configure' did not have execute permissions: corrected
Does anyone have a solution to this problem? I am using R version 4.0.3 and Biocmanager version 3.12 already thanks!
Those appear to be warnings (and were corrected) so the software must be installed. Have you tried to load the library?
It didn't install because library() can't load the package. I actually tried going back to R 3.6 but the same error pops up