development of NGS pipeline for variant calling in lung cancer

Question

[shubhamkumbhar420]

I am doing my undergraduate project of Pipeline development for variant calling in Nonsmall cell lung cancer. for that, I am trying to find literature about my topic, but I didn't find anything useful. anyone have anything to suggest?

Thanks

[Bioinformatician_in_trouble]

Tried Galaxy tutorial?https://usegalaxy.org/

[shubhamkumbhar420]

Thanks for the help, but "Identification of somatic and germline variants from tumor and normal sample pairs" this tutorial is there about cancer analysis. I want more in detailed about lung cancer. So I can refer and cite the papers in my project.

[WouterDeCoster]

What makes you think there are fundamental differences in the analysis of lung cancer vs 'general' cancer analysis?

[shubhamkumbhar420]

I don't want the pipeline to do analysis, I want literature for the reference purpose. And also how can I cite that tutorial from Galaxy!

[Bioinformatician_in_trouble]

for the literature, you need to either use GOOGLE or PUBMED, and regarding citing the tutorial of the galaxy, I think just citing GALAXY should be enough.Maybe this link https://galaxyproject.org/citing-galaxy/ could help you.