Pymol visualisation issue
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3.7 years ago
amoltej ▴ 100

Hi, I am new to pymol and trying to analyze the protein-ligand interaction. after analysis I get the .pse file but after opening that file in Pymol I can not see ligand molecule. can someone please help me why this is happening. I can see ligand molecule if I open in Chimera or discovery visualizer but I lose interaction profile that is visible in pymol. you can find the sample file here https://plip-tool.biotec.tu-dresden.de/plip-web/plip/result/92cfdf07-a1af-4902-92d9-b196d515aab8

pymol PLIP Protein-Ligand Interaction Profiler • 862 views
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