Entering edit mode
3.7 years ago
Chvatil
▴
130
Hello everyone, I need help to add information in my phylogenetic tree on each branch
.
I have two pieces of information at my disposal:
1 ) A phylogenetic tree in newick format :
**(mammal:0.14,turtle:0.02,(rayfinfish:0.25,(frog:0.01,salamander:0.01)50:0.12)95:0.09);**
2 ) A matrix with the edge number and information in the Information column:
Edge Inf
7 0
6 0
5 2
4 1
3 2
2 2
1 2
Does someone have an idea in order to add these informations by creating a NHX format
in python (witg ete3 for instance) or with a R package ?
Here is the tree :
You've already mentioned
ETE3
- what is it about this task that you cannot accomplish with a tool such as this?