Connecting two PDB structures in Pymol
0
0
Entering edit mode
3.8 years ago
Hansen_869 ▴ 80

Hi! Is it possible to connect two PDB structures easily in Pymol? I basically just want to connect the PDB files from where the sequence of PDB-1 ends to where PDB-2 starts. Is this possible? Thanks!

PDB Structures Connect • 1.2k views
ADD COMMENT
0
Entering edit mode

I don't know PyMol well enough to answer, but you could do this in the PDB files themselves as they're just plaintext. Just delete the relevant lines at the end of PDB-1 (TER lines I think) and the header info in PDB-2.

ADD REPLY
0
Entering edit mode

Doing so will just put them on top of each other, as they have almost the same coordinates. I need to link them together.

ADD REPLY

Login before adding your answer.

Traffic: 2055 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6