Question

Want to know whether this p-adj value is acceptable

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3.7 years ago

ashwing.kofficial ▴ 10

Hello everyone, hope all are doing well, I am doing my Rna-seq analysis and I ran it through deseq 2 and got my result file after which I annotated and got the gene list and chr too. I just wanted to know whether p-adj values can be the same or is something wrong with that. Thanks for your time. This is the DEGs table

enter image description here

RNA-Seq next-gen sequencing • 650 views

ADD COMMENT • link updated 3.7 years ago by ATpoint 85k • written 3.7 years ago by ashwing.kofficial ▴ 10

score 1 · Accepted Answer · 2021-03-21

1

Entering edit mode

3.7 years ago

ATpoint 85k

Yes, this is normal and expected. Please use google / the biostars search function next time before posting, found via "same padj DESeq2":

same padj for all the genes after DEseq analysis

ADD COMMENT • link 3.7 years ago by ATpoint 85k

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Thanks a lot AT point, I will follow your advice next time.

ADD REPLY • link 3.7 years ago by ashwing.kofficial ▴ 10