Question

Music Error

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12.1 years ago

will.lockwood ▴ 10

Hi,

I am trying to run bmr calc-covg in Genome MuSiC and keep receiving the following error:

Can't call method "print" on an undefined value at /usr/share/perl5/Genome/Model/Tools/Music/Bmr/CalcCovg.pm line 256

Does anyone know how I can resolve this issue?

Thanks a lot,

Will

music • 2.3k views

ADD COMMENT • link updated 12.1 years ago by Chris Miller 22k • written 12.1 years ago by will.lockwood ▴ 10

score 1 · Answer 1 · 2012-10-24

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12.1 years ago

Chris Miller 22k

If I'm skimming the code right, that appears to be where it's trying to write to a file in your output directory. Does the output directory exist? (the one you specified in the parameters?)

ADD COMMENT • link 12.1 years ago by Chris Miller 22k

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Thanks for the help Chris. It appears that the directory did exist but it was a permissions issue with Virtual Box.

It seems to work now.

ADD REPLY • link 12.1 years ago by will.lockwood ▴ 10

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Hi Chris Miller

I have been trying to use Music, but not successful, can you please help me to figure out

C: who can give me the data of genome music bmr calc-covg

Thanks !

ADD REPLY • link 9.5 years ago by Chirag Nepal ★ 2.4k