Searching Snp Or Genotype Of A Particular Publication From Dbsnp

Question

[Lds]

Hi fellows,

I'm now looking for the variants files from a published CELL paper entitled "Evolutionary History and Adaptation from High-Coverage Whole-Genome Sequences of Diverse African Hunter-Gatherers". It is said that all the SNP data are available via dbSNP, but I don't know how to fetch all the SNP found in this paper. Querying SNPs one by one is not possible, can anybody tell me how to fetch all the SNP data of a publication from dbSNP?

Thanks in advance

Answer 1

[Julien Textoris]

If you have a list of all SNP IDs of the paper, there is a batch query page at NCBI dbSNP website :

hope it helps !

Julien

[gs]

costs ~$30 to get the whole article

http://www.cell.com/abstract/S0092-8674(12)00831-8

whole genomes of five individuals in each of three different hunter-gatherer populations at >60 coverage: Pygmies from Cameroon and Khoesan-speaking Hadza and Sandawe from Tanzania. We identify 13.4 million variants, substantially increasing the set of known human variation.