I want to analyze all possible known mechanisms of regulation of gene expression and expression levels of a protein i.e. rhodopsin in normal cells and in various diseases like in cancer.
So I looked into Ensembl. I checked its expression various tissues at enter link description here
Now I am looking for more resources which tells about its expression levels in various conditions measured by RNA-Seq, microarray etc. I could not find any graphical information at http://www.ebi.ac.uk/gxa/gene/ENSG00000163914 and http://www.ncbi.nlm.nih.gov/geo/ I am also interested in other sorts of known information like epigenetic modifications etc. Could you please suggest further useful resources for this purpose?
Can you please be more specific? What have you tried and what is your research question? What papers have you read and what is your planed analysis strategy? Your current question reads like this: "I want to do everything. Help me."
Also, seems like this question is similar to the one you posted 8 minutes before it. Can these posts be combined? This would be to benefit you and make it easier to answer your questions regarding gene expression.