Hello every body. I have a Y11K protein-protein interaction network and I have used some methods to cluster it, I want to compare it with some known clusters to see the number of exact matches, could any one point me from where can I download them.
Thanks in advance.
It's not clear what you want to do. Are you interested in topologically similar clusters? Overlaps with other clusters?
I am interested in the overlap with other clusters, I mean with known clusters