Question

Secondary Structure Of A Protein In Biojava

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11.8 years ago

potassiumiodide0990 ▴ 80

Is there any biojava method which i can implement to predict the secondary structure of a protein for a given amino acid sequence?

I came across this class SecondaryStructureFeatureRenderer... but i am not understanding how to use its constructor... Class SecondaryStructureFeatureRenderer link

please help

biojava protein • 3.1k views

ADD COMMENT • link updated 11.8 years ago by joey0214.zhong ▴ 20 • written 11.8 years ago by potassiumiodide0990 ▴ 80

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You want to create a program for the secondary structure prediction or you want to predict a secondary structure of a protein?

ADD REPLY • link 11.8 years ago by AsoInfo ▴ 300

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i want to create a program for secondary structure prediction

ADD REPLY • link 11.8 years ago by potassiumiodide0990 ▴ 80

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Use an existing one.. Jpred for example. Otherwise, take some time to read about it before committing to make your own.

ADD REPLY • link 11.8 years ago by João Rodrigues ★ 2.5k

score 0 · Answer 1 · 2013-02-27

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11.8 years ago

joey0214.zhong ▴ 20

ha, I also want to do this ~ have you figured out it ?

ADD COMMENT • link 11.8 years ago by joey0214.zhong ▴ 20

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this should be a comment, not an answer.

ADD REPLY • link 11.8 years ago by Pierre Lindenbaum 164k