Validating Denovo Results And Effect Of Parameter
0
0
Entering edit mode
11.8 years ago
nareshmvr ▴ 10

for bacterial genome

how the parameters bubble size , K-mer , Length size , contig length , mimatch cost , insertion cost , deletion cost , length fraction , similarity fraction effects for Illumina data in Denovo Assembly .

finally how to validate the results , please explain with any example .

and can we do clustering for the Denovo assembly results for different K-mers , please give explanation if yes/no?

• 1.9k views
ADD COMMENT

Login before adding your answer.

Traffic: 2659 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6