Bam File: Which Column Change When We Flag The Duplicate Reads
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11.7 years ago

Hi everyone,

I would like to know which column or parameter change in bam file when we flag the PCR duplicate?

Thank you star

bam • 5.4k views
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5
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Did you check the SAM specification? http://samtools.sourceforge.net/SAM1.pdf

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1
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11.7 years ago

It is flag 1024 as explained here http://picard.sourceforge.net/explain-flags.html

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