Question

How To Plot A Circular Genome Map?

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11.7 years ago

cacaucenturion ▴ 250

Could someone tell me how the following figure is made? I have genbank format genome sequence file. Thanks!

plot • 16k views

ADD COMMENT • link updated 11.7 years ago by Sean Davis 27k • written 11.7 years ago by cacaucenturion ▴ 250

score 13 · Answer 1 · 2013-03-21

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11.7 years ago

Rm 8.3k

it is made using circos

ADD COMMENT • link 11.7 years ago by Rm 8.3k

score 6 · Answer 2 · 2013-03-21

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11.7 years ago

Leonor Palmeira 3.9k

The browsers suggested here might also help:

ADD COMMENT • link 11.7 years ago by Leonor Palmeira 3.9k

score 6 · Answer 3 · 2013-03-21

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11.7 years ago

Bioch'Ti ★ 1.1k

The ggbio [R] package is doing a decent job : http://genomebiology.com/content/13/8/R77

ADD COMMENT • link 11.7 years ago by Bioch'Ti ★ 1.1k

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Is there a tutorial for this?

ADD REPLY • link 10.2 years ago by Yannick Wurm ★ 2.5k

score 6 · Answer 4 · 2013-03-21

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11.7 years ago

Sean Davis 27k

ADD COMMENT • link 11.7 years ago by Sean Davis 27k