Question

Tool For Evolutionary Conservation Of Protein Folds

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11.9 years ago

bharat.85.monu ▴ 20

Hi,

I have a data-set of hon-homologous protein structures. Now I want to find evolutionary conservation of protein folds amongst those structures in the data set. Is there any tool for this ??

Regards

'BHARAT

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ADD COMMENT • link updated 11.9 years ago by mariusorion ▴ 70 • written 11.9 years ago by bharat.85.monu ▴ 20

score 1 · Answer 1 · 2013-03-25

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11.9 years ago

Giovanni M Dall'Olio 28k

You can use the PROSITE database to scan whether your sequences contain any conserved protein domain:

http://prosite.expasy.org/

ADD COMMENT • link 11.9 years ago by Giovanni M Dall'Olio 28k

score 1 · Answer 2 · 2013-03-25

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11.9 years ago

mariusorion ▴ 70

Try ConPlex online software.

ADD COMMENT • link 11.9 years ago by mariusorion ▴ 70