How To Make Circular Diagrams For Plasmids To Allow For Easy Comparison

Question

[Pappu]

I have sequences of several hundred plasmids in embl format. I want to make circular diagrams of them showing CDS and protein names for quick comparison. I am wondering if there is any tool which can run in batch to make such diagrams. The idea is to classify those prasmds in separate groups. Thanks,

[ancient_learner]

You can actually go for circos to generate such diagrams with high quality.

Answer 1

[Malachi Griffith]

• Vector NTI is very expensive commercial software, but it works.
• CLC Sequence Viewer is another alternative
• GENtle
• BioEdit
• APE

Answer 2

[David]

I know MacVector does it.