Error In Loading Vcfs To Plink Seq
0
0
Entering edit mode
11.5 years ago
Sheila ▴ 460

I am trying to make a PLINK/SEQ project and load 3 VCF files to it.

SNPs_NA12878.vcf

SNPs_NA12891.vcf

SNPs_NA12892.vcf

These files are all in the same directory called TestVCFs

MY COMMANDS:

 pseq testproject new-project --resources hg18
 pseq /path/to/project/testproject load-vcf --vcf /path/to/TestVCFs/*.vcf

OUTPUT:

 pseq error : database (/path/to/project/testproject_out/vardb) error (5) database is locked
 plinkseq warning: database is locked (repeated 6 times)
 plinkseq warning: preparing query database is locked

Can someone please advise me on what I'm doing wrong?!

vcf • 3.1k views
ADD COMMENT

Login before adding your answer.

Traffic: 2737 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6