Entering edit mode
11.4 years ago
Noa
▴
50
Hi!
I am using augustus to predict some genes for a fungi. I am stuck analyzing the GFF outputs. My question is: are there any ready-to-use tools/scripts that parse the GFF files? I would like get the accuracy (sensitivity & specificity ) per feature.
There script that calculates this for me? (to save me some time) I am currently testing augustus by checking the results for yeast, together with the annotated yeast genome.
greetz,
Noa z
See also How to compare gene models, Genome annotation quality measure
thnx. I already checked those. i thought there might be some update on them by now