Whole Exome Data Positive Controls

Question

[win]

Hi all. I am trying to validate a exome analysis pipeline and wanted to validate that. I wanted to know if someone know where I could find Exome Sequencing Data for which at at least a few mutations are published or at least validated by a few groups / people.

Any help will be highly appreciated.

Answer 1

[Alex Paciorkowski]

There are a couple of sources, but there are procedures to access data from both of them.

Try 1000genomes and dbGaP.

[win]

I have worked with 1000 Genomes Datasets but don't know where mutations are published for a particular sample. Do you know where that be found?

[User 59]

NA12878 has been sequenced/arrayed on dozens of platforms, cross reference it with one of those.

[win]

this is great, thanks.