Database For Protein Expression?
3
0
Entering edit mode
11.2 years ago
jlshi.nudt ▴ 240

Is there a database which presents the protein expression in different conditions(such as cancer, normal et.al.)?

Based on such a database, one can compare the protein expression with the transcriptional expression level.

protein database • 14k views
ADD COMMENT
0
Entering edit mode

By "protein expression" you mean "translation"?

ADD REPLY
0
Entering edit mode

Correct usage: 'Protein synthesis' and 'Gene expression'

ADD REPLY
3
Entering edit mode
11.2 years ago
Hamish ★ 3.3k

Some possible options for protein expression data from a couple of web and literature searches:

The list of Databases cross-referenced in UniProtKB is another possible source of protein expression data, since it lists many proteomics databases which may contain the type of expression data you are looking for.

ADD COMMENT
2
Entering edit mode
11.2 years ago
Spitshine ▴ 660

Pax-DB is a new, integrated resource of protein expression, which could be used to explore different data sets including cancer and across the above databases and organisms. http://pax-db.org/

ADD COMMENT
1
Entering edit mode
11.2 years ago
cdsouthan ★ 1.9k

Human Protein Atlas of course. As for any solid comparison between antibody, mass-spec (PRIDE) and transcript expression - best of luck

http://www.proteinatlas.org/

ADD COMMENT

Login before adding your answer.

Traffic: 1997 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6