Where Can I Find Some Agilent Sample Cel Files

Question

[lahat.albert]

I am working on a script to analyze affys and need to test/debug using various cel files, kinda got stuck trying to find agilent raw files .cel files.

Thank you.

[Rm]

As mentioned by others Agilent has Featured extracted text file not CEL. Look in GEO for example: http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GPL8852

[Neilfws]

I assumed "alignet" is supposed to be "agilent" and corrected it. Confusing that you then tag the post "affymetrix".

Answer 1

[David Westergaard]

CEL files are, to my knowledge, an Affymetrix ONLY format. Every CEL file I have ever worked with have come from Affymetrix platforms, whereas Agilent are always normal text files.

Answer 2

[Devon Ryan]

Just search GEO for "Agilent" and you'll find a very large number of published experiments, many of which have the .cel files included.