Regarding Rankprod
1
0
Entering edit mode
11.0 years ago

Dear All,

I tried to run RankProd in R which is installed in linux.

Because I have large datasets I tried to your RPadvance, it runs fine if I don't use huge=TRUE.

When I use this

RP.out <- RPadvance(data, cl, origin, num.perm=100, logged=TRUE, na.rm=TRUE, plot=FALSE, rand=123, huge=TRUE)

I get error

Error in RPadvance(data, cl, origin, num.perm=100, logged=TRUE, :unused argument(s) (huge=TRUE)

When I run the same thing in R installed in windows it runs fine.

Any idea how to overcome this.

Thanks in advance

Regards,
Ravi

bioconductor • 2.5k views
ADD COMMENT
0
Entering edit mode

make sure you are running the latest version of RankProd on both Linux and windows

ADD REPLY
0
Entering edit mode

Thanks for the response. Ya that was the problem indeed.

ADD REPLY
0
Entering edit mode
11.0 years ago

I found out where the problem was. I have two different version of RankProd running and the older version doesn't have memory efficient version.

Thanks,

Regards

ADD COMMENT
0
Entering edit mode

How to add so many datasets in rankprod

ADD REPLY

Login before adding your answer.

Traffic: 2658 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6