Hi!
Currently I've realised that there are available many public scripts to manage NGS data and sequence files in general.
Last month, I installed some packages for UCSC genome source tools from Bergman Lab and tools like pslTobed, saved a lot of time to me!
Now we are analysing NGS data, and I wonder if you know some collections of bioinformatics tools which can help me (like biopieces).
Thanks!
http://toolkit.tuebingen.mpg.de/