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10.8 years ago
alok.helix
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120
Can somebody please give me the corresponding Header for the following file generated after the use of Transdecoder??
FA_desaturase PF00487.19 257 TC00001|m.1 - 384 1.4e-32 113.1 18.0 1 1 1.9e-36 1.4e-32 113.1 12.5 3 250 83 345 81 348 0.87 Fatty acid desaturase
DUF3474 PF11960.3 136 TC00001|m.1 - 384 5.8e-09 36.0 0.1 1 1 1.3e-12 9.9e-09 35.3 0.1 84 132 16 64 6 67 0.85 Domain of unknown function (DUF3474)
ACOX PF01756.14 187 TC00006|m.10 - 664 6.2e-56 188.7 0.0 1 1 1.9e-59 9.6e-56 188.1 0.0 1 186 476 657 476 658 0.98 Acyl-CoA oxidase
Which is a better tool transdecoder or interproscan??
I'm guessing this is the output for HMMER, check their documentation.