Snp.Plotter Input Files

Question

[K_Star]

Hi,

Can anyone instruct me on where to save the snp.plotter input files (SNP.FILE, HAP.FILE, GENOTYPE.FILE) so that R can read them? I have created the files but do not know where to save them/which directory to place them in.

Thanks

k_star

[K_Star]

Panic over, figured it out, just had to identify the working directory and place the files there, so used getwd() command in R.

[siddharth.sethi5]

Hi, Can you please tell me how to create a genotype and hapmap file. I just have a ped file which i used for PLINK .