Running Clans For Protein Sequence Clustering

Question

[Pappu]

I am trying to run clans to cluster ~100 protein sequences. However it does not seem to converge. I am wondering how long it usually takes to run clustering.

Answer 1

[krutikeshpatel11]

I guess it will never stop because force vectors are used, however the graph may come at equilibrium after some time. You can find clusters (convex,network or linkage methods available) by going to >Windows (drop down) >find clusters option.I hope it solves answers the question.