Where To Find Mirna Related Microarray Data For Leukemia Patients?

Question

[jlshi.nudt]

I want to find as many as possible microarray data for miRNA. Is anyone familiar with this kind of data?

[Rm]

did you checked GEO: http://www.ncbi.nlm.nih.gov/gds/?term=leukemia+mirna

[jlshi.nudt]

I've checked GEO, but I wander there maybe some special topics about miRNA expression genome-wide. Thank you.

Answer 1

[ancient_learner]

check this http://mimirna.centenary.org.au/mep/formulaire.html It contains the tissue specific expression profile data including various cancers.

[jlshi.nudt]

Thank you, these data and tools are helpful.

Answer 2

[ff.cc.cc]

HI, I suggest these:

-TCGA: https://tcga-data.nci.nih.gov/tcga/tcgaCancerDetails.jsp?diseaseType=LAML&diseaseName=Acute%20Myeloid%20Leukemia

-ArrayExpress: http://www.ebi.ac.uk/arrayexpress/

[jlshi.nudt]

Thank you, TCGA is very useful to me.

Answer 3

[zhxq09]

You can use starBase Pan-Cancer Analysis Platform . starBase Pan-Cancer Analysis Platform is designed for deciphering Pan-Cancer Networks of lncRNAs, miRNAs, ceRNAs and RNA-binding proteins (RBPs) by mining clinical and expression profiles of 14 cancer types (>6000 samples) from The Cancer Genome Atlas (TCGA) Data Portal (all data available without limitations).

starBase generated Pan-Cancer networks of CLIP-Seq experimentally supported miRNA-lncRNA and miRNA-mRNA interactions.

Pan-Cancer miRNA-mRNA interactions can be available at http://starbase.sysu.edu.cn/targetSite.php