Matching Gene Symbols With Ensembl

Question

[gmkpoon]

Hello all!

I would like to find the gene symbols for a list generated by NCBI GEO (GSE32358 to be specific) where the spots are labeled only with ensembl IDs (e.g. ENSMUST00000080166). I found out that I could look them up one at a time. Is there a compiled list, or some way to do this lookup in a batch format?

Many thanks, Gregory

[Neilfws]

The answer is BioMart. If you search this site, you will find many similar questions with answers about how to use it. I am planning to write a tutorial about it, since this question comes up all the time.

Answer 1

[Ashutosh Pandey]

Already answered here in a detailed manner: A: Where can I download a file that has all Ensembl Gene IDs, Transcript IDs, and most importantly Gene Symbols

[Neilfws]

Yes, UCSC Table Browser is another option.