Problem Install Somatic Sniper

Question

[mehrdadk.67]

Hello everybody, I am currently trying to install somatic sniper 1.0.3 on ubuntu 10.4,I run the command below :

sudo gmt install somatic-sniper1.0.3

but there are Errore

ERROR: Failed to find package somatic-sniper1.0.3!

ERROR: Please see 'gmt install --help' for more information.

I would be greatfull for advise on how to make the installation work.

[Neilfws]

That error sounds like either you did not download the package, or you are not working in the directory to which it was downloaded. Are you following the installation instructions to the letter?

Answer 1

[margiezilla]

Try git

Make sure you have git installed and all the dependencies:
sudo apt-get install build-essential git-core cmake zlib1g-dev libncurses-dev

then download by running
git clone --recursive git://github.com/genome/somatic-sniper.git

then to compile and install
mkdir somatic-sniper/build
cd somatic-sniper/build
cmake ../
make deps
make -j
make test

you can also install this way if you are root if you run
sudo make install

instructions here: https://github.com/genome/somatic-sniper

Answer 2

[nnutter]

Looks like somatic-sniper1.0.3 isn't released as a Ubuntu Lucid package yet; somatic-sniper1.0.2 is the latest. I'll let the developers know.