Visualize in IGV mitochondrial variants found with MToolBox

Question

[BIN]

Hello, Does anyone know a better tool to visualize the mitochondrial genome other than IGV? I am trying to visualize variants called from MToolBox but doesn't work well for me. Thanks

Answer 1

[venkat]

You can check out SCI-VCF. Exploratory analysis and interactive visualization of genetic variants in a VCF file can be performed with SCI-VCF without the need for any programming.

Here are some helpful links: SCI-VCF | GitHub | Documentation