CUDA_ERROR_COMPAT_NOT_SUPPORTED_ON_DEVICE when running guppy basecaller
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Entering edit mode
3.6 years ago
eoneill627 ▴ 20

I have tried to run the ONT basecaller guppy. I have run this code several times before without any issues. Now (following a reboot) it is producing the error message:

[guppy/error] main: CUDA error at /builds/ofan/ont_core_cpp/ont_core/common/cuda_common.cpp:203: CUDA_ERROR_COMPAT_NOT_SUPPORTED_ON_DEVICE [guppy/warning] main: An error occurred in the basecaller. Aborting.

Is this a compatibility problem, and if so what can I do to solve it? I'm using Ubuntu 18.04.4 LTS (GNU/Linux 5.4.0-72-generic x86_64) and Guppy Basecalling Software, (C) Oxford Nanopore Technologies, Limited. Version 4.0.14+8d3226e, client-server API version 2.1.0

Here is my guppy code, which has always worked and hasen't been changed:

guppy_basecaller -i pathtoreads -r --device cuda:0 -s hac_fastqs_demul -c /opt/ont/ont-guppy/data/dna_r9.4.1_450bps_hac.cfg --num_callers 4 --require_barcodes_both_ends --trim_barcodes --detect_mid_strand_barcodes --barcode_kits "EXP-PBC001"

Thanks, Ed

basecalling ont guppy nanopore cuda • 1.8k views
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1
Entering edit mode
3.6 years ago
eoneill627 ▴ 20

Fixed by rebooting.

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