Editing Seurat object metadata
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3.5 years ago
LacquerHed ▴ 30

Have Seurat object metadata where clusters and sub-clusters are numbered only, wondering how I can change those numbers to the names of the clusters in the metadata. Thanks.

scRNA-seq Seurat snRNA-seq • 3.6k views
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The way your question is formulated is confusing, as it is not clear what you want to achieve. Add an example of how your metadata looks like (e.. head(srtObject@meta.data)), and specify which columns you are talking about. If you want to label the clusters by a different column, already in the table, you can use Idents(srtObject) <- new_column.

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