Entering edit mode
3.4 years ago
ariel
▴
250
I'm trying to create an index for GRCh37. I get the error below despite having loads of memory.
I'm running Ubuntu 20.10 in WLS2.
(base) balter@winmac:~$ bwa index -a bwtsw Homo_sapiens.GRCh37.dna.toplevel.fa
[bwa_index] Pack FASTA... 396.80 sec
[gzclose] buffer error
(base) balter@winmac:~$ free -mh
total used free shared buff/cache available
Mem: 50Gi 126Mi 33Gi 0.0Ki 16Gi 49Gi
Swap: 13Gi 0B 13Gi
(base) balter@winmac:~$ lsb_release -a
No LSB modules are available.
Distributor ID: Ubuntu
Description: Ubuntu 20.10
Release: 20.10
Codename: groovy
see buffer error bwa