miRNA tool for search targets for genes

Question

[Rafael Soler]

Hi!

I am looking for a tool that can search for different miRNAs and the targets of these, ordered by how much that miRNA is represented. For example, if I have mir-32, mir-449 and mir-128, imagine that they have an X gene that is top 5 target in all 3 miRNAs. Well, I want that gene comes out as a top gene.

Do you know something like that? Thanks!

[Nitin Narwade]

I guess one way to do this is to run some target prediction tools, something like listed here, and then rank the output based on match score or free energy or some other essential parameters.

NOTE: I never did this sort of analysis but it is just a suggesstion.

[Rafael Soler]

Thank you! I was thinking in something similar! But I wanted to know if somebody did it before :)

Thanks!