How many reads does Delly use for variant calling?

Question

[gt]

Does anyone know how many reads delly uses for variant calling?

Answer 1

[trausch]

It uses the entire BAM file and requires at least 2 paired-ends or split-reads to call a variant.

[gt]

awesome, thanks!

[gt]

actually, do you know how many freebayes uses for variant calling?

[archanaverma433]

Do we need to specify anything for haploid organism , when running Delly caller or it can detect automatically?

Thanks