Extract reads used for contigs assembly

Question

[Clet]

Hi all,

Basically I want to realize a plot with all reads from each contigs resulting from my asssembly with the last version of Velvet. To do that I am looking for a script or anything else to parse an AFG file or any other solution to get a file with each contigs of my assembly and all the reads used for the assembly of those contigs.

Best,

[hs]

Hi, i am challeging with same problem. Can you solve it and how?

[cpad0112]

Please move it to a new post with more details and please rephrase the question. Did you try the solution furnished using quast below?

Answer 1

[neranjan]

how about using quast software to get a analysis report on the assembly http://quast.sourceforge.net/quast

[Clet]

Thanks neranjan, I will try with