how to apply DE-kupl in my data for differential expression ?

Question

[m90]

my professor wants me to make classical differential expression in my data and also differential expression by using DE-kupl . I read paper talking about workflow of DE-kupl but i dont know how to get command lines related to it to use it in terminal so can anyone help me to know what i should do ?

Answer 1

[ATpoint]

I think https://github.com/Transipedia/dekupl contains all you need to know