Entering edit mode
3.3 years ago
Khushal
•
0
Is there a package or tool to find annotations for microarray probes of Candida albicans in R, like what we have for Homo sapiens (hsapiens_gene_ensembl) in biomaRt for mapping probe ids to its corresponding gene symbol ?
not sure about R. but can use prokka for annotation in linux
Thanks for your suggestion. I read about prokka, it is used to annotate the contigs. I have microarray intensity data that is available on GEO Datasets. Example: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE64383. I want to know if there are any packages available for annotation of the probes used in these experiments.
well m not sure about that..!!