hlk hiloh hioh

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3.3 years ago

pollyyhjo ▴ 10

PUTTY

what does the code

Please offer a descriptive answer, thanks.

genome putty • 1.1k views

ADD COMMENT • link 3.3 years ago by pollyyhjo ▴ 10

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homework.

 grep ">” contigs.fasta | wc –l

what does it tell you ?

ADD REPLY • link 3.3 years ago by Pierre Lindenbaum 164k

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Definitely.

It is not that difficult to answer. Simply type grep --help and wc --help and you will see that grep searches for patterns in files, while wc counts bytes, words and lines in a file. If you actually run this with contigs.fasta present it should be pretty obvious what it does.

ADD REPLY • link 3.3 years ago by Mensur Dlakic ★ 28k

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I have never done coding before so all you said is totally new to me. I would appreciate if a detailed description is given as answer to my question. Thanks

ADD REPLY • link 3.3 years ago by pollyyhjo ▴ 10

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what are the best resource to learn Linux bash scripting for Bioinformatics

ADD REPLY • link 3.3 years ago by Pierre Lindenbaum 164k

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We are not here to help with homework assignments. Whoever gave you this problem to solve had a certain educational goal you should achieve on your own. Many of us on this forum are educators, and I have no intent of undermining my colleagues' goals for you by giving you a complete solution.

Besides, there is no coding here. This is just a concatenation of the two well known Unix/Linux commands, for which I have already given you clues.

ADD REPLY • link 3.3 years ago by Mensur Dlakic ★ 28k

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