Entering edit mode
3.2 years ago
ben83
▴
50
On snpEff 5.0, if you do java -jar snpEff.jar databases and look for Saccharomyces cerevisiae, you will find (among many other entries):
R64-1-1.75 Saccharomyces_cerevisiae https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_R64-1-1.75.zip
R64-1-1.99 Saccharomyces_cerevisiae https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_R64-1-1.99.zip
Saccharomyces_cerevisiae Saccharomyces_cerevisiae https://snpeff.blob.core.windows.net/databases/v5_0/snpEff_v5_0_Saccharomyces_cerevisiae.zip
The entry that is simply named Saccharomyces_cerevisiae -- what is it? Is it a reference database? Possibly the latest R64 which would be R64-3? Or is it something else?
R64-1-1.75 is Snpff Genome Version Name
R64-1-1.75 worked on Galaxy( eu )