Entering edit mode
3.1 years ago
lessismore
★
1.4k
Hi all, it's already few hours that I spending trying to fix circlize errors.
1) Does somebody know what means this error? (below)
2) Does somebody know an alternative package to try ?
Thanks in advance for any help
```r
> dput(my_matrix2)
structure(c("1", "0.95", "0.95", "0.95", "0.95", "0.95", "1",
"1", "0.9", "1", "0.95", "0.95", "0.95", "0.9", "0.85", "1",
"1", "0.95", "1", "1", "0.9", "0.95", "0.8", "0.7", "1", "0.9",
"0.9", "1", "1", "0.95", "0.95", "0.9", "0.85", "0.9", "0.85",
"0.55", "1", "1", "0.9", "0.8", "0", "0.8", "0.5517241", "0.5517241",
"0.5517241", "0.5517241", "0.5172414", "0.5517241", "0.5172414",
"0", "0.5172414", "0.5517241", "0", "0", "0.5517241", "0.5172414",
"0.5172414", "0", "0.5517241", "0.5172414", "0.5517241", "0.5517241",
"0", "0.5172414", "0", "0", "0.5517241", "0", "0", "0.5517241",
"0.5517241", "0", "0.5172414", "0.5517241", "0.5517241", "0",
"0", "0.5517241", "0", "0.5172414", "0.5172414", "0", "0", "0",
"0.9411765", "0.8235294", "0.8235294", "0.8823529", "0.8823529",
"0.6470588", "0.8823529", "0.8823529", "0.7647059", "0.9411765",
"0.9411765", "0.9411765", "0.8823529", "0.7647059", "0.6470588",
"0.8823529", "0.8235294", "0.8235294", "0.9411765", "0.9411765",
"0.9411765", "0", "0.7058824", "0.8823529", "0.9411765", "0.9411765",
"0.8235294", "0.9411765", "0.9411765", "0.5882353", "0.9411765",
"0.9411765", "0.6470588", "0", "0", "0.7647059", "0.9411765",
"0.9411765", "0", "0.6470588", "0.9411765", "0.8823529"), .Dim = c(42L,
3L), .Dimnames = list(NULL, c("aba", "bea", "cea")))
> dput(split)
structure(c(3L, 3L, 3L, 2L, 3L, 2L, 2L, 2L, 3L, 1L, 2L, 2L, 1L,
2L, 3L, 1L, 3L, 3L, 1L, 1L, 1L, 1L, 3L, 2L, 3L, 2L, 1L, 2L, 3L,
2L, 1L, 3L, 3L, 1L, 3L, 2L, 1L, 3L, 1L, 1L, 2L, 3L), .Label = c("a",
"b", "c"), class = "factor")
col_fun1 = colorRamp2(c(0, 0.5, 1), c("blue", "green", "red"))
circos.heatmap(my_matrix2, split = split, col = col_fun1)
Error: not enough space for cells at track index '5'.
```