How to find/extract sequences of protein coding genes and Transposable elements from rice transciptome.gtf file ?

Question

[isha.lily20]

Hello researchers,

I am stuck in project and require effective solutions

1. How to find out protein coding genes and transposable elements from rice transcriptome.gtf file?
2. How to extract out protein coding genes and transposable elements from rice transcriptome.gtf file?

Thank you

[GenoMax]

This toolkit will help: Extracting genomic feature sequences from GTF/GFF files with AGAT