Learning how to create a pipeline in python

Question

[Nai]

I am new for programming now. Years back I did in perl. I would like to learn bioinformatics pipeline creation in python.

[Pierre Lindenbaum]

https://snakemake.readthedocs.io/en/stable/

[Kevin Blighe]

I have modified your question title in order to avoid false-positive [wasteful] hits from a search engine for people looking for pipeline info in other languages.

[Nai]

Thank you Kevin!

[Wayne]

• https://carpentries-incubator.github.io/workflows-snakemake/

• https://hackmd.io/SU2NB89JRu6fRPtSFizEEA?view

• https://hackmd.io/7k6JKE07Q4aCgyNmKQJ8Iw?view

• https://github.com/ctb/2019-snakemake-ucdavis/blob/master/tutorial.md

• https://vincebuffalo.com/blog/2020/03/04/understanding-snakemake.html

• https://github.com/deto/Snakemake_Tutorial