How to convert HTSeq raw read counts to FPKMs?
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3.1 years ago
s.singh ▴ 70

Hi,

I have a C.elegans RNAseq raw read counts which I generated from HTSeq. I want to convert them to FPKM values. I used "countToFPKM" to do that, but I am not able to get "Biomart.annotations.hg38.txt" file for C.elegans.

Is there an easy way to get FPKM values? Any help will be highly appreciated.

HTSeq countToFPKM counts FPKM read • 575 views
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